We have developed novel approaches for ultra-fast DNA analysis by measuring of an ionic current blockage and parallel optical readout of DNA translocation through single nanopores and nanopore arrays. Parallelism is achieved by the fabrication of high density solid-state arrays of single nanometer resolution pores and simultaneous optical readout of DNA translocation. Optical readout in arrays circumvents the direct electrical addressing of each pore. We will present new nanofabrication techniques to create nanoscale pores in 50 nm thick silicon nitride membrane using transmission electron microscopy (TEM) and scanning transmission electron microscopy (STEM) and discuss our progress towards ultra-fast DNA sequencing.
Volume Subject Area:
Fluids Engineering
1.
Song
L.
Hobaugh
M. R.
Shustak
C.
Cheley
S.
Bayley
H.
Gouaux
J. E.
Science.
1996
, 274
, 1859
1859
.2.
Kasianowicz
J.
Brandin
E.
Branton
D.
Deamer
D. W.
Proc. Natl. Acad. Sci. USA.
1996
, 93
, 13770
13770
.3.
Akeson
M.
Branton
D.
Kasianowicz
J.
Brandin
E.
Deamer
D. W.
Biophys. J.
1999
, 77
, 3227
3227
.4.
Meller
A.
Nivon
L.
Branton
D.
Phys. Rev. Lett.
2001
, 86
, 3435
3435
.5.
Li
J.
Stein
D.
McMullan
C.
Branton
D.
Aziz
M. J.
Golovchenko
J. A.
Nature.
2001
, 412
, 166
166
.6.
Storm
A. J.
Chen
J. H.
Ling
X. S.
Zandbergen
H. W.
Dekker
C.
Nature Mat.
2003
, 2
, 537
537
.7.
Lo
C. J.
Aref
T.
Bezryadin
A.
Nanotechnology.
2006
, 17
, 3264
3264
.8.
Smeets
R. M. M.
Keyser
U. F.
Krapf
D.
Wu
M. Y.
Dekker
N. H.
Dekker
C.
Nano Lett.
2006
, 6
, 89
89
.9.
Wu
M. Y.
Krapf
D.
Zandbergen
M.
Zandbergen
H.
Baton
P. E.
Appl. Phys. Lett.
2005
, 87
, 113106
–1
.10.
Heng
J. B.
Aksimentiev
A.
Ho
C.
Marks
P.
Grinkova
Y. V.
Sligar
S.
Schulten
K.
Timp
G.
Biophys. J.
2006
, 90
, 1098
–1106
.11.
Bates
M.
Burns
M.
Meller
A.
Biophys. J.
2003
, 84
, 2366
2366
.12.
Mathe´
J.
Visram
H.
Viasnoff
V.
Rabin
Y.
Meller
A.
Biophys. J.
2004
, 87
, 3205
3205
.13.
Mathe´
J.
Aksimentiev
D.
Nelson
K.
Schulten
K.
Meller
A.
Proc. Natl. Acad. Sci. USA.
2005
, 102
, 12377
12377
.14.
Kim, M. J.; Wanunu, M.; Bell, D.; Meller, A.; Adv. Mat. 2006, in review.
15.
Kim, M. J.; McNally, B.; Murata, K.; Meller, A.; Nanotechnology. 2006, in review.
This content is only available via PDF.
Copyright © 2006
by ASME
You do not currently have access to this content.