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Proceedings Papers

An Improved Shape Annealing Algorithm for the Generation of Coated DNA Origami Nanostructures

Bolutito Babatunde, Jonathan Cagan, Rebecca E. Taylor
Proc. ASME. IDETC-CIE2023, Volume 3B: 49th Design Automation Conference (DAC), V03BT03A009, August 20–23, 2023
Publisher: American Society of Mechanical Engineers
Paper No: DETC2023-113633
https://doi.org/10.1115/DETC2023-113633
View Paper titled, An Improved Shape Annealing Algorithm for the Generation of Coated DNA Origami Nanostructures
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Topics: Algorithms, Annealing, Design, DNA, Nanostructures , Nanotechnology, Optimization, Shapes
Proceedings Papers

Surface Functionalization of Silicon MEMS Biochemical Sensors for the Detection of Foodborne Pathogens

Md Ebrahim Khalil Bhuiyan, Dustin Smith, Eric J. Voss, Chin-Chuan Wei, Mohammad Shavezipur
Proc. ASME. IDETC-CIE2021, Volume 11: 15th International Conference on Micro- and Nanosystems (MNS), V011T11A003, August 17–19, 2021
Publisher: American Society of Mechanical Engineers
Paper No: DETC2021-69708
https://doi.org/10.1115/DETC2021-69708
View Paper titled, Surface Functionalization of Silicon MEMS Biochemical Sensors for the Detection of Foodborne Pathogens
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Topics: Biosensors, DNA, Microelectromechanical systems, Self-assembly, Sensors, Silicon, Atomic force microscopy, Bacteria, Biological agents, Coating processes
Proceedings Papers

Towards the Synthesis of Aesthetic Product Form

Stephen N. Smyth, David R. Wallace
Proc. ASME. IDETC-CIE2000, Volume 4: 12th International Conference on Design Theory and Methodology, 113-120, September 10–13, 2000
Publisher: American Society of Mechanical Engineers
Paper No: DETC2000/DTM-14554
https://doi.org/10.1115/DETC2000/DTM-14554
View Paper titled, Towards the Synthesis of Aesthetic Product Form
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Topics: Computation, Conceptual design, Cycles, DNA, Geometric modeling, Geometry, Industrial design, Product design
Proceedings Papers

Fabrication and Testing of a MEMS System for Injection of DNA Into Plant Cells

Taylor Brown, Sandra Hope, Brian D. Jensen
Proc. ASME. IDETC-CIE2019, Volume 4: 24th Design for Manufacturing and the Life Cycle Conference; 13th International Conference on Micro- and Nanosystems, V004T08A003, August 18–21, 2019
Publisher: American Society of Mechanical Engineers
Paper No: DETC2019-98019
https://doi.org/10.1115/DETC2019-98019
View Paper titled, Fabrication and Testing of a MEMS System for Injection of DNA Into Plant Cells
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Topics: DNA, Manufacturing, Microelectromechanical systems, Testing, Damage, Silicon, Failure
Proceedings Papers

Augmented Microscopy for DNA Damage Quantification: A Machine Learning Tool for Environmental, Medical and Health Sciences

Michele Bernardini, Alessandro Ferri, Lucia Migliorelli, Sara Moccia, Luca Romeo, Sonia Silvestri, Luca Tiano, Adriano Mancini
Proc. ASME. IDETC-CIE2019, Volume 9: 15th IEEE/ASME International Conference on Mechatronic and Embedded Systems and Applications, V009T12A003, August 18–21, 2019
Publisher: American Society of Mechanical Engineers
Paper No: DETC2019-97902
https://doi.org/10.1115/DETC2019-97902
View Paper titled, Augmented Microscopy for DNA Damage Quantification: A Machine Learning Tool for Environmental, Medical and Health Sciences
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Topics: Biomedicine, Damage, DNA, Machine learning, Microscopy, Computation
Proceedings Papers

Programmable Kirigami: Cutting and Folding in Science, Technology and Architecture

Jingyang Liu, Grace Chuang, Hun Chun Sang, Jenny E. Sabin
Proc. ASME. IDETC-CIE2019, Volume 5B: 43rd Mechanisms and Robotics Conference, V05BT07A034, August 18–21, 2019
Publisher: American Society of Mechanical Engineers
Paper No: DETC2019-97557
https://doi.org/10.1115/DETC2019-97557
View Paper titled, Programmable Kirigami: Cutting and Folding in Science, Technology and Architecture
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Topics: Cutting, Design, DNA, Feedback, Finite element analysis, Geometry, Manufacturing, Materials properties, Shapes, Simulation
Proceedings Papers

DNA-Structured Linear Actuators

Kyle Zampaglione, Andrew P. Sabelhaus, Lee-Huang Chen, Alice M. Agogino, Adrian K. Agogino
Proc. ASME. IDETC-CIE2016, Volume 5A: 40th Mechanisms and Robotics Conference, V05AT07A071, August 21–24, 2016
Publisher: American Society of Mechanical Engineers
Paper No: DETC2016-60291
https://doi.org/10.1115/DETC2016-60291
View Paper titled, DNA-Structured Linear Actuators
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Topics: Actuators, DNA, Displacement, Engineering prototypes, Rails, Cables, Design, Robotics, Rotation, Stress
Proceedings Papers

Injection Force Effects on Propidium Iodide Uptake in Nanoinjected HeLa Cells

Tyler E. Lewis, Brian D. Jensen, Sandra H. Burnett
Proc. ASME. IDETC-CIE2015, Volume 4: 20th Design for Manufacturing and the Life Cycle Conference; 9th International Conference on Micro- and Nanosystems, V004T09A005, August 2–5, 2015
Publisher: American Society of Mechanical Engineers
Paper No: DETC2015-47630
https://doi.org/10.1115/DETC2015-47630
View Paper titled, Injection Force Effects on Propidium Iodide Uptake in Nanoinjected HeLa Cells
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Topics: Biological cells, Biomedicine, Cell membranes, DNA, Membranes, Patient treatment, Silicon chips, Stress, Testing
Proceedings Papers

Pseudo-Rigid-Body Models of Compliant DNA Origami Mechanisms

Lifeng Zhou, Alexander E. Marras, Carlos E. Castro, Hai-jun Su
Proc. ASME. IDETC-CIE2015, Volume 5B: 39th Mechanisms and Robotics Conference, V05BT08A041, August 2–5, 2015
Publisher: American Society of Mechanical Engineers
Paper No: DETC2015-46838
https://doi.org/10.1115/DETC2015-46838
View Paper titled, Pseudo-Rigid-Body Models of Compliant DNA Origami Mechanisms
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Topics: DNA, Compliant mechanisms, Design, Deformation, Fluctuations (Physics), Hinges
Proceedings Papers

Gene Transcription and Translation in Design

Yuemin Hou, Ji Linhong
Proc. ASME. IDETC-CIE2015, Volume 7: 27th International Conference on Design Theory and Methodology, V007T06A001, August 2–5, 2015
Publisher: American Society of Mechanical Engineers
Paper No: DETC2015-46128
https://doi.org/10.1115/DETC2015-46128
View Paper titled, Gene Transcription and Translation in Design
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Topics: Design, Proteins, DNA, Biology, Engineering teachers
Proceedings Papers

Estimating Constitutive Law of a Filament From its Deformed Shapes Using Input Reconstruction

Roshan Chavan, Harish Palanthandalam-Madapusi, Sachin Goyal
Proc. ASME. IDETC-CIE2015, Volume 8: 27th Conference on Mechanical Vibration and Noise, V008T13A087, August 2–5, 2015
Publisher: American Society of Mechanical Engineers
Paper No: DETC2015-46791
https://doi.org/10.1115/DETC2015-46791
View Paper titled, Estimating Constitutive Law of a Filament From its Deformed Shapes Using Input Reconstruction
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Topics: Constitutive equations, Shapes, DNA, Deformation, Dynamics (Mechanics), Filters, Molecular dynamics, Molecular dynamics simulation, State estimation
Proceedings Papers

The Kinematic Principle for Designing DNA Origami Mechanisms: Challenges and Opportunities

Hai-Jun Su, Carlos E. Castro, Alexander E. Marras, Lifeng Zhou
Proc. ASME. IDETC-CIE2015, Volume 5B: 39th Mechanisms and Robotics Conference, V05BT08A040, August 2–5, 2015
Publisher: American Society of Mechanical Engineers
Paper No: DETC2015-46833
https://doi.org/10.1115/DETC2015-46833
View Paper titled, The Kinematic Principle for Designing DNA Origami Mechanisms: Challenges and Opportunities
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Topics: Design, DNA, Kinematics, Computer simulation, Computer software, Design automation, Functional materials, Linkages, Manufacturing, Molecular machines
Proceedings Papers

A Method for Identification of the Constitutive Law of Biological Filaments From Their Dynamic Equilibria

Soheil Fatehiboroujeni, Sachin Goyal, Apostol Gramada
Proc. ASME. IDETC-CIE2015, Volume 6: 11th International Conference on Multibody Systems, Nonlinear Dynamics, and Control, V006T10A003, August 2–5, 2015
Publisher: American Society of Mechanical Engineers
Paper No: DETC2015-46776
https://doi.org/10.1115/DETC2015-46776
View Paper titled, A Method for Identification of the Constitutive Law of Biological Filaments From Their Dynamic Equilibria
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Topics: Constitutive equations, Deformation, DNA, Equilibrium (Physics), Fibers, Molecular dynamics simulation, Shapes, Torsion
Proceedings Papers

The Dynamics of DNA Supercoiling: A Brownian Dynamics Study

Ivenso Ikenna, Todd D. Lillian
Proc. ASME. IDETC-CIE2015, Volume 6: 11th International Conference on Multibody Systems, Nonlinear Dynamics, and Control, V006T10A007, August 2–5, 2015
Publisher: American Society of Mechanical Engineers
Paper No: DETC2015-47444
https://doi.org/10.1115/DETC2015-47444
View Paper titled, The Dynamics of DNA Supercoiling: A Brownian Dynamics Study
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Topics: DNA, Dynamics (Mechanics), Torque, Stress, Buckling, Deformation, Engineering simulation, Simulation
Proceedings Papers

A Qualitative Failure Analysis Using Function-Based Performance State-Machines for Fault Identification and Propagation During Early Design Phases

Charlie B. DeStefano, David C. Jensen
Proc. ASME. IDETC-CIE2014, Volume 1A: 34th Computers and Information in Engineering Conference, V01AT02A035, August 17–20, 2014
Publisher: American Society of Mechanical Engineers
Paper No: DETC2014-34803
https://doi.org/10.1115/DETC2014-34803
View Paper titled, A Qualitative Failure Analysis Using Function-Based Performance State-Machines for Fault Identification and Propagation During Early Design Phases
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Topics: Design, Failure analysis, Machinery, Failure, Complex systems, DNA, Failure mechanisms, Manufacturing, Risk, Safety
Proceedings Papers

Primary Resonance of MEMS/NEMS Circular Plate Biosensors

Dumitru I. Caruntu, Reynaldo Oyervides
Proc. ASME. IDETC-CIE2014, Volume 4: 19th Design for Manufacturing and the Life Cycle Conference; 8th International Conference on Micro- and Nanosystems, V004T09A007, August 17–20, 2014
Publisher: American Society of Mechanical Engineers
Paper No: DETC2014-35496
https://doi.org/10.1115/DETC2014-35496
View Paper titled, Primary Resonance of MEMS/NEMS Circular Plate Biosensors
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Topics: Biosensors, Microelectromechanical systems, Nanoelectromechanical systems, Resonance, Bacteria, Bifurcation, Biology, Biomedicine, Damping, DNA
Proceedings Papers

Effects of DNA Encapsulation on Buckling Instability of Carbon Nanotube Based on Nonlocal Elasticity Theory

Jacob Rafati, Mohsen Asghari, Sachin Goyal
Proc. ASME. IDETC-CIE2014, Volume 6: 10th International Conference on Multibody Systems, Nonlinear Dynamics, and Control, V006T10A002, August 17–20, 2014
Publisher: American Society of Mechanical Engineers
Paper No: DETC2014-34430
https://doi.org/10.1115/DETC2014-34430
View Paper titled, Effects of DNA Encapsulation on Buckling Instability of Carbon Nanotube Based on Nonlocal Elasticity Theory
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Topics: Buckling, Carbon nanotubes, DNA, Elasticity, Nanostructures , Pressure, Modeling, Nanobiotechnology, Nanotechnology, Shells
Proceedings Papers

Brownian Dynamics Simulation of the Dynamics of Stretched DNA

Ikenna D. Ivenso, Todd D. Lillian
Proc. ASME. IDETC-CIE2014, Volume 6: 10th International Conference on Multibody Systems, Nonlinear Dynamics, and Control, V006T10A007, August 17–20, 2014
Publisher: American Society of Mechanical Engineers
Paper No: DETC2014-35487
https://doi.org/10.1115/DETC2014-35487
View Paper titled, Brownian Dynamics Simulation of the Dynamics of Stretched DNA
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Topics: DNA, Dynamics (Mechanics), Simulation, Polymers, Deformation, Dynamic response, Electrolytes, Electrostatics, Hydrodynamics, Packaging
Proceedings Papers

PCR Free Detection of Hepatitis B Virus DNA Using a Nanostructured Impedance Biosensor

Chun-Cheng Chen, Gou-Jen Wang
Proc. ASME. IDETC-CIE2014, Volume 4: 19th Design for Manufacturing and the Life Cycle Conference; 8th International Conference on Micro- and Nanosystems, V004T09A004, August 17–20, 2014
Publisher: American Society of Mechanical Engineers
Paper No: DETC2014-34866
https://doi.org/10.1115/DETC2014-34866
View Paper titled, PCR Free Detection of Hepatitis B Virus DNA Using a Nanostructured Impedance Biosensor
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Topics: Biosensors, DNA, Electrodes, Electrochemical impedance spectroscopy, Probes, Aluminum, Biotechnology, Honeycomb structures, Nanoparticles, Thin films
Proceedings Papers

Modeling Thermal Fluctuations of Bio-Filaments With Elastic Rod Theory

Sachin Goyal
Proc. ASME. IDETC-CIE2013, Volume 7A: 9th International Conference on Multibody Systems, Nonlinear Dynamics, and Control, V07AT10A013, August 4–7, 2013
Publisher: American Society of Mechanical Engineers
Paper No: DETC2013-13457
https://doi.org/10.1115/DETC2013-13457
View Paper titled, Modeling Thermal Fluctuations of Bio-Filaments With Elastic Rod Theory
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Topics: Fluctuations (Physics), Modeling, Deformation, Collisions (Physics), Constitutive equations, DNA, Dynamics (Mechanics), Engines, Kinetic energy, Motors