We present numerical and experimental results on an innovative method to enhance the hybridization process in the field of microarray based analytics. Hybridization reaction based on biochip approaches take several hours due to the fact that these reactions are diffusion limited. To monitor the binding of fluorescent labeled analyte molecules to the probe molecules on the chip surface we use a home made fluorescent detection system that allows continues monitoring of the reaction on chip. Mixing is the key to overcome the diffusion barrier and increase reaction rate. We present a novel mixing device that increases reaction time The AC-electrokinetic signal produces an electrothermal flow that enhances the DNA binding. We show an optimization of the AC-signal and the electrodes design based on numerical simulations to obtain highest efficiency in mixing of analyte solutions and we report experimental results on dephosphorylation experiment.
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ASME 2008 Fluids Engineering Division Summer Meeting collocated with the Heat Transfer, Energy Sustainability, and 3rd Energy Nanotechnology Conferences
August 10–14, 2008
Jacksonville, Florida, USA
Conference Sponsors:
- Fluids Engineering Division
ISBN:
978-0-7918-4841-8
PROCEEDINGS PAPER
DNA Hybridization Enhancement in Microarrays Using AC-Electrothermal Flow
F. Bottausci,
F. Bottausci
University of California-Santa Barbara, Santa Barbara, CA
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T. Neumann,
T. Neumann
University of California-Santa Barbara, Santa Barbara, CA
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M. A. Mader,
M. A. Mader
University of California-Santa Barbara, Santa Barbara, CA
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I. Mezic,
I. Mezic
University of California-Santa Barbara, Santa Barbara, CA
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L. Jaeger,
L. Jaeger
University of California-Santa Barbara, Santa Barbara, CA
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M. Tirrell
M. Tirrell
University of California-Santa Barbara, Santa Barbara, CA
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F. Bottausci
University of California-Santa Barbara, Santa Barbara, CA
T. Neumann
University of California-Santa Barbara, Santa Barbara, CA
M. A. Mader
University of California-Santa Barbara, Santa Barbara, CA
I. Mezic
University of California-Santa Barbara, Santa Barbara, CA
L. Jaeger
University of California-Santa Barbara, Santa Barbara, CA
M. Tirrell
University of California-Santa Barbara, Santa Barbara, CA
Paper No:
FEDSM2008-55200, pp. 629-636; 8 pages
Published Online:
June 30, 2009
Citation
Bottausci, F, Neumann, T, Mader, MA, Mezic, I, Jaeger, L, & Tirrell, M. "DNA Hybridization Enhancement in Microarrays Using AC-Electrothermal Flow." Proceedings of the ASME 2008 Fluids Engineering Division Summer Meeting collocated with the Heat Transfer, Energy Sustainability, and 3rd Energy Nanotechnology Conferences. Volume 2: Fora. Jacksonville, Florida, USA. August 10–14, 2008. pp. 629-636. ASME. https://doi.org/10.1115/FEDSM2008-55200
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